SpyInfo
HOWARTH LAB
SOCIAL
ADDRESS
Department of Pharmacology,
University of Cambridge,
Tennis Court Road,
Cambridge
CB2 1PD
UK
CONTACT
e: mh2186@cam.ac.uk
t: 01223 334176
2024 Mark Howarth. All rights reserved.
Papers and Patents using Spy technology
Many of these publications don’t come up from a Pubmed search or citation search, so it should be useful
to bring them all together and hyperlinked (now >1,000 publications). Patents may be omitted if there is a journal
paper covering very similar work. Ones with particular relevance to
IMMUNOLOGY
,
MATERIALS
(polymers or
mechanobiology),
IMAGING
,
SEQUENCING
or
ENZYMES
are marked.
For an overview, please see our open-access review “
Power to the Protein
” from 2020.
SpyBank
is a database of >1,000 Tag/Catcher aa sequences to download (
Excel file
), from publications below.
SpyBank includes includes expression organism, Tag/Catcher location (N-terminal, internal, C-terminal) and
annotated linkers, as a reference for groups creating their own fusions. SpyBank itself is described in:
“Insider information on successful covalent
protein coupling with help from SpyBank.
Keeble AH, Howarth M. Meth Enz 2019
PDF
”.
(See note on codon usage at
Reagents
page).
Most recent
here
. Publications 301-600
here
. Publications 1-300
here
.
900
Endothelial discoidin domain receptor 1 senses flow to modulate YAP activation
Jiayu Liu…Jing Zhou. Nature Communications volume 14, Article number: 6457 (2023)
MATERIALS
Living Magnetotactic Microrobots Based on Bacteria with a Surface-Displayed CRISPR/Cas12a System
for Penaeus Viruses Detection
Haoxiang Chen…Lei Ren. ACS Appl. Mater. Interfaces 2023 Oct
MATERIALS
Accurate location of two conserved linear epitopes of PEDV utilizing monoclonal antibodies induced by
S1 protein nanoparticles
Minghui Li…Gaiping Zhang. Int J Biol Macromol 2023 Oct 5:127276.
IMMUN
MicroRNAs are necessary for the emergence of Purkinje cell identity
Norjin Zolboot…Giordano Lippi. bioRxiv 2023 September
BACTERIAL MICROCOMPARTMENT VIRUS-LIKE PARTICLES
Patent Application Number 18033282 Publication Date 28.09.2023 Inventors Yong Quan Tan et al.
GROWTH AND SITE-SPECIFIC ORGANIZATION OF MICRO-SCALE BIMOLECULAR DEVICES ON LIVING
CELLS
Patent Application Number 18003462 Publication Date 28.09.2023 Inventors Rebecca B. Schulman et al.
Hypoallergenic chimeric virus-like particles for the development of shrimp tropomyosin allergen Pen m 1-specific blocking antibodies
Supapich Chanasit…Alain Jacquet. Allergy 2023 September
IMMUN
Native Agarose Gels and Contact Blotting as Means to Optimize the Protocols for the Formation of Antigen–Ligand Complexes
Claudia D’Ercole and Ario de Marco. Bioengineering 2023 September
Two molecule force spectroscopy on ligand–receptor interactions
Jiacheng Zuo…Hongbin Li. Nanoscale 2023 September
MATERIALS
A SARS-CoV-2 nanoparticle vaccine based on chemical conjugation of loxoribine and SpyCatcher/SpyTag
Wenying Yan…Tao Hu. Int J Biol Macromol 2023 Sep 29;127159.
IMMUN
Ligand requirements for immunoreceptor triggering
Michael I. Barton…Anton van der Merwe. bioRxiv 2023 Sept
IMMUN
Engineered Immunogens to Elicit Antibodies Against Conserved Coronavirus Epitopes
Brenda Kapingidza…Mihai L. Azoitei. bioRxiv 2023 September
IMMUN
Bioluminescent detection of viral surface proteins using branched multivalent protein switches
Alexander Grawe…Maarten Merkx. bioRxiv 2023 Sept
IMMUN
MATERIALS
Engineered Escherichia coli Consortia Function in a Programmable Pattern for Multiple Enzymatic Biosynthes
is
Wenxue Zhang…Ping Wang. ACS Appl. Mater. Interfaces 2023 September
ENZ
Recording Binding Information Directly into DNA-Encoded Libraries Using Terminal Deoxynucleotidyl Transferase
Lukas A. Schneider…Dennis Gillingham. JACS 2023 September
ENZ
Snoopligase-catalyzed molecular glue enables efficient generation of hyperoligomerized TRAIL variant with enhanced antitumor
effect
T She…X Lu. Journal of Controlled Release. September 2023, Pages 856-870
MATERIALS
Molecular basis of product recognition during PIP5K-mediated production of PI(4,5)P2 with positive feedback
Benjamin R. Duewell…Scott D. Hansen. bioRxiv 2023 September
ENZ
The molecular reach of antibodies determines their SARS-CoV-2 neutralisation potency
Anna Huhn…Omer Dushek. bioRxiv 2023 Sept
IMMUN
AP profiling resolves co-translational folding pathway and chaperone interactions in vivo
Xiuqi Chen…Christian M. Kaiser. bioRxiv 2023 September
In-situ Single-Molecule Investigations of the Impacts of Biochemical Perturbations on Conformational Intermediates of Monomeric α-Synuclein
Wenmao Huang…Jie Yan. bioRiv 2023 Sept
MATERIALS
HIV-1 binds dynein directly to hijack microtubule transport machinery
Somayesadat Badieyan…Michael A. Cianfrocco. bioRxiv 2023 Sept
MATERIALS
A platform for dissecting force sensitivity and multivalency in actin networks
Joseph T. Levin…Gregory M. Alushin. bioRxiv 2023 Aug
MATERIALS
Rationally designed multimeric nanovaccines using icosahedral DNA origami for molecularly
controlled display of SARS-CoV-2 receptor binding domain
Qingqing Feng…Xiao Zhao. bioRiv 2023 Aug
IMMUN
MATERIALS
Engineering Protein Nanoparticles Functionalized with an Immunodominant Coxiella burnetii
Antigen to Generate a Q Fever Vaccine
Aaron Ramirez…Szu-Wen Wang. Bioconjugate Chem. 2023 September
IMMUN
Compact and modular bioprobe: Integrating SpyCatcher/SpyTag recombinant proteins with
zwitterionic polymer-coated quantum dots
Sunghwan Kim…Jongnam Park. J Colloid Interface Sci 2023 Aug 6;652(Pt A):184-194.
875
SpyCombinator Assembly of Bispecific Binders
Claudia L Driscoll…Mark Howarth. bioRxiv 2023 Sept
Neoantigen-Based Nanovaccine In Combination with Immune Checkpoint Inhibitors Abolish Postsurgical Tumor Recurrence and Metastasis
Peng Zheng…Yanbing Ma. Small 2023 Aug
IMMUN
GENETICALLY CONTROLLED NANOSCOPY CONTRAST-GENERATING UNITS, GENETICALLY CONTROLLED STRUCTURAL ELEMENTS, GENETICALLY CONTROLLED
SCAFFOLDS, NANOBIOMATERIAL BASED THEREON, AND USE THEREOF IN NANOSOCOPY METHODS
Patent WO/2023/156638 Publication Date 24.08.2023 Inventors WESTMEYER, Gil Gregor et al.
MATERIALS
IMAGING
METHODS AND COMPOSITIONS FOR TREATING OR AMELIORATING CARDIAC MUSCLE
ARRHYTHMIAS AND SKELETAL MUSCLE TREMORS
Patent WO/2023/159234 Publication Date 24.08.2023 Inventors HARRIS, Samantha, P.
MATERIALS
A platform for dissecting force sensitivity and multivalency in actin networks
Joseph T. Levin…Gregory M. Alushin. bioRxiv 2023.08.15.553463
MATERIALS
Myddosome clustering in IL-1 receptor signaling regulates the formation of an NF-kB
activating signalosome
Fakun Cao…Marcus J Taylor. EMBO Reports (2023)e57233
IMMUN
Affinity-induced covalent protein-protein ligation via the SpyCatcher-SpyTag
interaction
Jacob O. Fierer…Edward A. Bayer. Green Carbon 17 July 2023
ENZ
Visible light-induced specific protein reaction delineates early stages of cell adhesion
Rolle Rahikainen…Mark Howarth. J. Am. Chem. Soc. 2023 Oct and
bioRxiv 2023.07.21.549850
MATERIALS
IMAGING
ANTIBODIES AND ANTIBODY FRAGMENTS AND ANALOGUES SPECIFIC FOR CHONDROITIN SULFATE
Patent WO/2023/148398 Publication Date 10.08.2023 Applicants VAR2 PHARMACEUTICALS APS [DK]/[DK]
IMMUN
ANTIBODIES FOR CORONAVIRUS AND USES THEREOF
Patent US Application Number 18060814 Publication Date 10.08.2023 Pamela J. Bjorkman et al.
IMMUN
METHODS FOR GENERATING NUCLEIC ACID ENCODED PROTEIN LIBRARIES AND USES THEREOF
Patent WO/2023/150742 Publication Date 10.08.2023 Inventors ABATE, Adam et al.
Self-assembled multienzyme complex facilitates synthesis of gluc
osylglycerol from maltodextrin and glycerol
Xinming Sun…Yuanxia Sun. J Sci Food Agric 2023 Aug 8.
ENZ
Harnessing split fluorescent proteins in modular protein logic for advanced whole-cell detection
Ping-Hen Lim…Yi-Chun Yeh. Analytica Chimica Acta 1275, 22 Sept
2023, 341593
IMAGING
Thermostability enhancement of polyethylene terephthalate
degrading PETase using self- and nonself-ligating protein
scaffolding approaches
Barindra Sana…John F Ghadessy. Biotechnol Bioeng 2023 Aug 9.
ENZ
Toward Selective Synthesis of Protein Olympiadanes via Orthogonal Active Templates in One Step
Fan Zhang…Wen-Bin Zhang. CCCS Chem 2023 Jul
MATERIALS
KITS FOR ANALYSIS USING NUCLEIC ACID ENCODING AND/OR LABEL
US patent Application Number 18166461, Application Date 08.02.2023. Encodia, Inc.
Nanoparticle-based multivalent human antibodies offer potent and broad neutralization against Omicron sublineages
Yizhen Wang…Ningshao Xia. Signal Transduction and Targeted Therapy volume 8: 284 (2023)
IMMUN
Raman Spectroscopy Combined with Malaria Protein for Early Capture and Recognition of Broad-Spectrum Circulating
Tumor Cells
Xinning Liu…Jinbo Yang. Int. J. Mol. Sci. 2023, 24(15), 12072
IMAGING
In vivo fate of systemically administered encapsulin protein nanocages and implications for their use in targeted drug
delivery
Claire Rennie…Andrew Care. bioRxiv 2023 July
MATERIALS
Truly tiny acoustic biomolecules for ultrasound imaging and therapy
Bill Ling…Mikhail G. Shapiro. bioRxiv 2023 June
MATERIALS
IMAGING
Cell Cycle Dependent Orchestration of Surface Layer Biogenesis in Caulobacter cre
scentus
Matthew Herdman…Tanmay A.M. Bharat. Nature Communications volume 15, Article number: 3355 (2024) and bioRxiv
2023 June
MATERIALS
De novo design of modular protein hydrogels with programmable intra- and extracellular viscoelasticity
Rubul Mout…David Baker. bioRxiv 2023 June
MATERIALS
POLYPEPTIDE TERMINAL BINDERS AND USES THEREOF
US Patent Application Number 17539033 Publication Date 13.07.2023 Encodia,
Inc.
ENZ
SEQUENCING
MULTIPLEXED IMMUNOSIGNAL AMPLIFICATION USING HYBRIDIZATION CHAIN
REACTION-BASED METHOD
US Patent Application Number 18045811 Publication Date 13.07.2023 Rui LIN
Minmin LUO
ENZ
Construction of metal–organic framework-based multienzyme system for l-tert-
leucine production
Ru Wang…Feng Xue. Bioprocess and Biosystems Engineering 2023 July
MATERIALS
ENZ
Bacterial Surface-Assembled Chitinosome for Dismantling Chitin into N-Acetyl
Glucosamine
Chao Du…Guimin Zhang. ACS Sustainable Chem. Eng. 2023 July
MATERIALS
ENZ
850
CATENATED VAR2CSA RECOMBINANT PROTEIN, PREPARATION METHOD THEREFOR, AND USE
THEREOF
Patent WO/2023/130667 Publication Date 13.07.2023 CAS LAMVAC (GUANGZHOU) BIOMEDICAL
TECHNOLOGY CO., LTD [CN]/[CN]
IMMUN
Long-term retention of antigens in germinal centers is controlled by the spatial organization of the
follicular dendritic cell network
Ana Martínez-Riaño…Pavel Tolar. Nature Immunology (2023 July)
IMMUN
Malaria Biomimetic for Tumor Targeted Drug Delivery
Jessica Pihl…Ali Salanti. ACS Nano July 12, 2023
IMMUN
Cooperation between bHLH transcription factors and histones for DNA access
Alicia K. Michael…Nicolas H. Thomä. Nature 2023 Jul
Simultaneous Mapping of DNA Binding and Nucleosome Positioning with SpLiT-ChEC
Orion G. B. Banks…Laura E. McKnight. bioRxiv Jul 2023
ENZ
METHOD FOR PRODUCING VIRUS-FILTERING MODIFIED LECTIN-BINDING MODIFIED BIOFILM
Patent WO/2023/128981 Publication Date 06.07.2023 BILKENT UNIVERSITESI Inventors SEKER, Urartu
Ozgur Safak et al.
MATERIALS
The position of Spy Tag/Catcher system in hepatitis B core protein particles affects the
immunogenicity and stability of the synthetic vaccine
Y Sheng…S Zhang. Vaccine 28 June 2023
IMMUN
T Cell Activating Thermostable Self-Assembly Nanoscaffold Tailored for Cellular Immunity Antigen
Delivery
Jinsong Zhang…Zeliang Chen. Advanced Science 3 July 2023
MATERIALS
IMMUN
IMMOBILISED ENZYME
Patent WO/2023/118901 Publication Date 29.06.2023 FABRICNANO LIMITED [GB]/[GB]
MATERIALS
ENZ
METHODS FOR BALANCING ENCODING SIGNALS OF ANALYTES
Patent WO/2023/122698 Publication Date 29.06.2023 ENCODIA, INC. [US]/[US]
MATERIALS
ENZ
SEQUENCING
Biocatalytic Foams from Microdroplet-Formulated Self-Assembling Enzymes
Julian S Hertel…Christof M Niemeyer. Adv Mater 2023 Jun 26;e2303952.
MATERIALS
ENZ
Bioinspired Amyloid Fibril-Based Hydrogel with Engineering Programable Functionalities for
Diverse Applications
Weiqiang Wang…Honghua Ge. Advanced Functional Materials 26 June 2023
MATERIALS
An RBD virus-like particle vaccine for SARS-CoV-2 induces cross-variant antibody resp
onses
in mice and macaques
Yuanyuan Li…Jing Jin. Signal Transduction and Targeted Therapy volume 8, Article number:
173 (2023)
IMMUN
Self-assembled ferritin nanoparticles displaying PcrV and OprI as an adjuvant-free
Pseudomonas aeruginosa vaccine
Yuhang Li…Jiang Gu. Front. Immunol., 21 June 2023
IMMUN
Sneaking in SpyCatcher using cell penetrating peptides for in vivo imaging
James Tyler…Behzad Rad. Nanotechnology 2023 June
IMAGING
Using CombiCells, a platform enabling titration and combinatorial display of cell surface ligands, to investigate the sensitivity
and costimulatory requirements of TCRs and CARs
Ashna Patel…Omer Dushek. EMBO J 2023 Dec and bioRxiv 2023 Jun
IMMUN
Designed Multifunctional Spider Silk Enabled by Genetically Encoded Click Chemistry
Bojing Jiang…Fei Sun. Advanced Functional Materials 15 June 2023
MATERIALS
Preclinical immunogenicity and protective efficacy of a SARS-CoV-2 RBD-based vaccine produced with the thermophilic
filamentous fungal expression system Thermothelomyces heterothallica C1
Mariana Gonzalez-Hernandez…Albert D. M. E. Osterhaus. Front. Immunol., 09 June 2023
IMMUN
Modification of Bacterial Microcompartments with Target Biomolecules via Post-Translational SpyTagging
David Mark Beal…Martin Warren. Mater. Adv., 2023 June
MATERIALS
SWITCHABLE POLYPEPTIDE AND ITS USE FOR GENTLE AFFINITY PURIFICATION
Patent WO/2023/099876 Publication Date 08.06.2023 HOWARTH, Mark, ANUAR, Irsyad Khairil, RAHIKAINEN, Rolle
ANTIBODIES FOR CORONAVIRUSES AND USES THEREOF
Patent WO/2023/102476 Publication Date 08.06.2023 BJORKMAN, Pamela J. et al.
IMMUN
RATIONALLY DESIGNED IMMUNOGENS
Patent WO/2023/102571 Publication Date 08.06.2023 SCHMIDT, Aaron, G. et al.
IMMUN
Design and Evolution of Enhanced Peptide–Peptide Ligation for Modular Transglutaminase Assembly
Anthony H. Keeble, Dominic P. Wood, and Mark Howarth. Bioconjugate Chem. 2023 June
ENZ
A universal reagent for detection of emerging diseases using bioengineered multifunctional yeast nanofragments
Junrong Li…Matt Trau. Nature Nanotechnology (2023) June
MATERIALS
825
Catalyst-free thiazolidine formation chemistry enables the facile construction of peptide/protein-cell
conjugates (PCCs) at physiological pH
Xiang-Quan Liu…Xiaobao Bi. Chem Sci. 2023 June
MATERIALS
Chemically cross-linked hydrogels from repetitive protein arrays
Rossana Boni…Lynne Regan. J Struct Biol 2023 May 26;215(3):107981.
MATERIALS
SpyTag/Catcher display of influenza M2e peptide on norovirus-like particle provides stronger immunization than
direct genetic fusion
Vili Lampinen…Minna M. Hankaniemi. Front. Cell. Infect. Microbiol. Volume 13 - 2023 | doi: 10.3389/fcimb.2023.1216364
IMMUN
A novel self-purified auxiliary protein enhances the lichenase activity towards lichenan for biomass degradation
Rui Zhou…Guangya Zhang. Applied Microbiology and Biotechnology (2023)
ENZ
IMMOBILISED ENZYME
Patent WO/2023/094823 Publication Date 01.06.2023 FABRICNANO LIMITED
ENZ
Modular antibodies reveal DNA damage-induced mono-ADP-ribosylation as a second wave of PARP1 signaling
EJ Longarini…I Matic. Mol Cell May 2023
METHODS AND COMPOSITIONS FOR DELIVERY OF MOLECULES AND COMPLEXES TO REACTION SITES
US patent 17988622 Application Date 16.11.2022 Publication
Date 25.05.2023 Pacific Biosciences of California, Inc.
SEQUENCING
THERMOSTABLE POLYMERASE VARIANTS
Patent WO/2023/089175 Publication Date 25.05.2023
ROCHE DIAGNOSTICS GMBH [DE]/[DE](DE)
ENZ
DIRECTLY FUNCTIONALIZED ELECTROCHMICAL
TRANSISTEORS, AND CONVECTION DRIVEN ULTRA-
RAPID DETECTION OF BIOMARKERS USING
TRANSISTORS
Patent WO/2023/089569 Publication Date 25.05.2023 INAL,
Sahika et al.
MATERIALS
RAPID PRODUCTION OF BISPECIFIC ANTIBODIES FROM OFF-
THE-SHELF IGGS WITH HIGH YIELD AND PURITY
Patent WO/2023/092106 Publication Date 25.05.2023 LINGHAN, Mei et al.
COMPOSITIONS THAT REDUCE TEMPLATE THREADING INTO A NANOPORE
Patent US Application Number 17817480 Application Date 04.08.2022 Roche Sequencing Solutions, Inc.
SEQUENCING
METHODS FOR BARCODING MACROMOLECULES IN INDIVIDUAL CELLS
Patent WO/2023/086847 Publication Date 19.05.2023 ENCODIA, INC. [US]/[US]
SEQUENCING
Different Strategies Affect Enzyme Packaging into Bacterial Outer Membrane Vesicles
Scott N. Dean…Gregory A. Ellis. Bioengineering 2023
ENZ
Phase-Separated Synthetic Organelles Based on Intrinsically Disordered Protein Domain for Metabolic Pathway Assembly in Escherichia coli
Li Wan…Wanmeng Mu. ACS Nano May 16, 2023
MATERIALS
Biosynthesis and Immunological Evaluation of a Dual-Antigen Nanoconjugate Vaccine against Brucella melitensis
Jing Huang…Li Zhu. Engineering 12 May 2023
IMMUN
Improving the specific activity and stability of alkaline pectinase PEL3 through SpyTag/SpyCatcher cyclization
Chao Du…Guimin Zhang. Biotech Lett May 2023
ENZ
Asymmetric Assembly and Self-Adjuvanted Antigen Delivery Platform for Improved Antigen Uptake and Antitumor Effect
Jianghua Yang…Zeliang Chen. Bioconjugate Chem. 2023
IMMUN
SARS-CoV-2 RBD dimers elicit response comparable to VLPs in mice
J. Love…Sergio Rodriguez-Aponte. ResearchSquare 2023 May
IMMUN
VIRAL PARTICLES RETARGETED TO SKELETAL MUSCLE
Patent WO/2023/081850 Publication Date 11.05.2023 REGENERON PHARMACEUTICALS, INC. [US]/[US]
cis-B7:CD28 interactions at invaginated synaptic membranes provide CD28 co-stimulation and promote CD8+ T cell function and anti
-
tumor immunity
Yunlong Zhao…Enfu Hui. Immunity 8 May 2023
IMMUN
Spy chemistry enables stable protein immobilization on iron oxide nanoparticles with enhanced magnetic properties
Chu Shi…Ning Gu. Journal of Materials Science & Technology. 7 May 2023
MATERIALS
Preparation of a Klebsiella pneumoniae conjugate nanovaccine using glycol-engineered Escherichia coli
Yan Liu…Li Zhu. Microbial Cell Factories. 2023 May
IMMUN
ENZ
Active Template Synthesis of Protein [n]Catenanes Using Engineered Peptide–Peptide Ligation Tools
Fan Zhang…Wen-Bin Zhang. CCS Chemistry 5 May 2023
MATERIALS
Bispecific T cell-engager targeting oncofetal chondroitin sulfate induces complete tumor regression and protective immune memory in
mice
Nanna Skeltved…Morten A. Nielsen. Journal of Experimental & Clinical Cancer 42, Article number: 106 (2023)
IMMUN
Intranasal VLP-RBD vaccine adjuvanted with BECC470 confers immunity against Delta SARS-CoV-2 challenge in K18-hACE2-mice
Katherine S Lee…F. Heath Damron. bioRxiv Apr 2023
IMMUN
800
Multiparametric domain insertional profiling of Adeno-Associated Virus VP1
Mareike D. Hoffmann…Daniel Schmidt. bioRxiv Apr 2023
Highly efficiency production of D-allulose from inulin using curli fiber multi-enzyme cascade catalysis
Y Chen…L Jiang. International Journal of Biological Macromolecules 241, 30 June 2023, 124468
ENZ
Autoinhibitory module underlies species difference in shear activation of von Willebrand factor
Nicholas A. Arce…Renhao Li. Journal of Thrombosis and Haemostasis 20, Issue 11, November 2022,
Pages 2686-2696
MATERIALS
Spatiotemporal functional assembly of split protein pairs through a light-activated SpyLigation
Emily R. Ruskowitz…Cole A. DeForest. Nature Chemistry 15 (2023)
MATERIALS
Genetically encoded barcodes for correlative volume electron microscopy
Felix Sigmund…Gil Gregor Westmeyer. Nature Biotechnology (2023)
MATERIALS
Highly modular hepatitis B virus-like nanocarriers for therapeutic protein encapsulation and targeted delivery to triple
negative breast cancer cells
Daniel Yur…Wilfred Chen. J Mat Chem B 2023
IMMUN
Two-Molecule Force Spectroscopy on Proteins
Jiacheng Zuo and Hongbin Li. ACS Nano 2023 April 13
MATERIALS
VACCINES AGAINST CORONAVIRUS INFECTION USING LIPID A ANALOGS AS ADVUVANTS
WO/2023/060078 Publication Date 13.04.2023 DAMRON, Fredrick Heath et al.
IMMUN
New botulinum neurotoxin constructs for treatment of chronic pain
Charlotte Leese…Bazbek Davletov. Life Science Alliance 2023 April
A photoreceptor-based hydrogel with red light-responsive reversible sol-gel tra
nsition as transient cellular
matrix
Maximilian Hörner…Wilfried Weber. bioRxiv 2023 April
MATERIALS
A highly efficient and specific “grafting to” route for stable protein-polymer conjugates based on Spy chemistry
Di Zhang…Hui Zhao. Polymer 7 April 2023
MATERIALS
In situ preparation of programmable curli nanomaterials as fine-tuned sustainable supports enabling
selective and oriented incorporation of enzymes
Hao Dong…Ping Wang. Catalysis Science & Technology 2023 April
MATERIALS
ENZ
Display of multiple proteins on engineered canine parvovirus-like particles expressed in cultured silkworm
cells and silkworm larvae
Jian Xu…Enoch Y. Park. Front. Bioeng. Biotechnol., 16 February 2023
MATERIALS
Bioengineering of air-filled protein nanoparticles by genetic and chemical functionalization
Ram Karan…Magnus Rueping. J Nanobiotechnology. 2023 Mar 25;21(1):108.
MATERIALS
HiBiT-SpyTag: A Minimal Tag for Covalent Protein Capture and Degrader Development
Tiffany Tsang…Radosław P. Nowak. ACS Chem. Biol. 2023
ENZ
DNA segment capture by Smc5/6 holocomplexes
Michael Taschner & Stephan Gruber. Nature Structural & Molecular Biology (2023)
METHODS AND PARTICLES FOR MODULATING AN IMMUNE RESPONSE
Patent WO/2023/052600 Publication Date 06.04.2023 ADAPTVAC APS [DK]/[DK]
IMMUN
Construction of "lock-key" biological living material based on double engineered bacteria and its
application on intestinal retention in vivo
Minghui Zhang…Hanjie Wang. Sheng Wu Gong Cheng Xue Bao 2023 Mar 25;39(3):1163-1174.
MATERIALS
A multivalent Plasmodium falciparum circumsporozoite protein-based nanoparticle malaria vaccine elicits
a robust and durable antibody response against the junctional epitope and the major repeats
Geetanjali Pendyala…Ravi S. Kane. Bioeng and Trans Med 28 March 2023
IMMUN
ASFV proteins presented at the surface of T7 phages induce strong antibody responses in mice
Yuanfang Li…Jinhai Huang. J Virol Methods 2023 Mar 23;114725.
IMMUN
Macroporous Epoxy-Based Monoliths Functionalized with Anti-CD63 Nanobodies for Effective Isolation of
Extracellular Vesicles in Urine
by Julia Neumair…Ario de Marco. Int. J. Mol. Sci. 2023, 24(7), 6131
MATERIALS
ANTI-VIRUS MOIETY IMMOBILISED IN A MATRIX WO/2023/037119
Patent WO/2023/037119 Publication Date 16.03.2023 SAMATVA RESEARCH CORPORATION [CA]/[CA]
IMMUN
An Immobilised Silicon-Carbon Bond-Forming Enzyme for Anaerobic Flow Biocatalysis
Sabrina Gallus…Kersten S. Rabe. ChemCatChem 21 March 2023
ENZ
On-grid purification of electron microscopy samples via a 3D-printed flow-cell
IMAGING
MATERIALS
Kailash Ramlaul…Christopher H. S. Aylett. bioRxiv 2023 March
Highly Hydrophobic Films of Engineered Silk Proteins by a Simple Deposition Method
Teemu Välisalmi… Markus B. Linder. Langmuir 2023 March
MATERIALS
775
Opto-APC: Engineering of cells that display phytochrome B on their surface for optogenetic studies of
cell-cell interactions
Marissa Russ…Wolfgang W. Schamel. Front. Mol. Biosci., 20 February 2023
Protein Ligation-assisted Reconstitution of Split HRP Fragments for Facile Production of HRP fusion Proteins in
E. coli
Seungnyeong Heo…Joong-jae Lee. ChemBioChem15 March 2023
ENZ
Step-wise mechanical unfolding and dissociation of the GAIN domains of ADGRG1/GPR56,
ADGRL1/Latrophilin-1 and ADGRB3/BAI3: insights into the mechanical activation hypothesis of adhesion
G protein-coupled receptors
Chaoyu Fu…Jie Yan. bioRxiv 2023 March
MATERIALS
CARRIER MATRIX COMPRISING DODECIN PROTEIN
Patent US 17789260 Inventors MARTIN GRININGER et al.
MATERIALS
Replication Protein A Enhances Kinetics of Uracil DNA Glycosylase on ssDNA and Across DNA Junctions: Explored with a DNA Repair Complex Produced with
SpyCatcher/SpyTag Ligation
Sharon N. Greenwood…Brian P. Weiser. ChemBioChem 08 March 2023
ENGINEERED COMPOSITIONS
Patent WO/2023/028603 Publication Date 02.03.2023 HUMABS BIOMED SA [CH]/[CH] VIR BIOTECHNOLOGY, INC. [US]/[US] GLAXOSMITHKLINE SA [BE]/[BE]
IMMUN
Proactive vaccination using multiviral Quartet Nanocages to elicit broad anti-coronavirus responses.
Rory A Hills…Mark Howarth. Nat Nano 2024 and bioRxiv 2023 Feb
IMMUN
Robust single membrane protein tweezers
Seoyoon Kim…Duyoung Min. bioRxiv 2023 Feb
MATERIALS
Piconewton forces mediate GAIN domain dissociation of the latrophilin-3 adhesion GPCR
Brian L. Zhong…Alexander R. Dunn. bioRiv 2023
MATERIALS
The Ribosome Maturation Factor Rea1 utilizes nucleotide independent and ATP-hydrolysis driven Linker remodelling
for the removal of ribosome assembly factors
Johan Busselez…Helgo Schmidt. bioRxiv 2023
MATERIALS
Docking Domain Engineering in a Modular Polyketide Synthase and its Impact on Structure and Function
Lynn Buyachuihan…Martin Grininger. bioRxiv 2023
ENZ
Lanmodulin-Functionalized Magnetic Nanoparticles as a Highly Selective Biosorbent for Recovery of Rare Earth
Elements
Quanhui Ye…Na Wei. Environ. Sci. Technol. 2023
MATERIALS
Full-colour Jabuticaba-like nanostructures via the multiplex and orthogonal self-assembly of protein-conjugated
quantum dots with engineered biofilms
Zhengtao Deng…Timothy K Lu. Mater Horiz. 2023 Feb 14.
MATERIALS
Display of multiple proteins on engineered canine parvovirus-like particles expressed in cultured silkworm cells and
silkworm larvae
Jian Xu…Enoch Y. Park. Front. Bioeng. Biotechnol., 16 February 2023
IMMUN
A Moonlighting Superpositively Charged SpyCatcher
Tingting Yang…Wen-Bin Zhang. CCS Chemistry 15 Feb 2023
Carbohydrate fatty acid monosulphate: oil-in-water adjuvant enhances SARS-CoV-2 RBD nanoparticle-induced
immunogenicity and protection in mice
Etsuro Nanishi…Ofer Levy. npj Vaccines volume 8, Article number: 18 (2023)
IMMUN
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Novel bovine viral diarrhea virus (BVDV) virus-like particle vaccine candidates presenting the E2 protein using the SpyTag/Sp
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Engineering a minimal SilkCatcher/Tag pair compatible with
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Normalizing the Immune Macroenvironment via Debulking Surgery to Strengthen Tumor Nanovaccine Efficacy and Eliminate Metastasis
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Spy&IAC enables specific capture of SpyTagged proteins for rapid assembly of plug-and-display nanoparticle vaccines
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Improvement of Modular Protein Display Efficiency in SpyTag-Implemented Norovirus-like Particles
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PROTEIN PARTICLES COMPRISING A DIPHTHERIA TOXIN CROSS REACTING MATERIAL (CRM) AMINO ACID
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A multivalent antibody assembled from different building blocks using tag/catcher systems:
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Heavy-chain CDR3-engineered B cells facilitate in vivo evaluation of HIV-1 vaccine candidates
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Orthogonal protein decoration of DNA nanostructures based on SpyCatcher-SpyTag
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Adenovirus-Inspired Virus-like-Particles Displaying Melanoma Tumor Antigen Specifically
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ADENOVIRAL VECTORS AND VACCINES THEREOF
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Improving the Synthesis Efficiency of Amino Acids Such as L-Lysine by Assembling
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COMBINATION OF PEPTIDE LINKERS FOR PROTEIN COVALENT SELF-ASSEMBLY USING SPONTANEOUS ISOPEPTIDE BOND
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The synergism of lytic polysaccharide monooxygenases with lichenase and their co-immobilization on
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NOVEL UNIVERSAL VACCINE PRESENTING SYSTEM
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Macromolecular assembly of bioluminescent protein nanoparticles for enhanced imaging
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SpyStapler-mediated assembly of nanoparticle vaccines
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Engineering synthetic microbial consortium for cadaverine biosynthesis from glycerol
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Enhanced thermal stability of the β-galactosidase BgaB from Bacillus circulans by cyclization mediated via
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SpyPhage: A Cell-Free TXTL Platform for Rapid Engineering of Targeted Phage Therapies
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Site-Specific and Tunable Co-immobilization of Proteins onto Magnetic Nanoparticles via Spy Chemistry
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Heterologous Expression of Thermotolerant α-Glucosidase in Bacillus subtilis 168 and Improving Its
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Display of Streptococcus iniae α-Enolase on the Surface of Virus-Like Particles (VLPs) of Nervous Necrosis
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Cryo-EM reveals a mechanism of USP1 inhibition through a cryptic binding site
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Directional immobilization of D-allulose 3-epimerase using SpyTag/SpyCatcher strategy as a
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Long-term retention of antigens in germinal centres is controlled by the spatial organisation
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Mechanical regulation of Titin N2B-us conformation and its binding to FHL2
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AN ARTIFICIAL PROTEIN-CAGE COMPRISING ENCAPSULATED THEREIN A GUEST CARGO
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ENDOTOXIN-FREE PRODUCTION OF RECOMBINANT SUBUNIT VACCINE COMPONENTS
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Directing ricin-based immunotoxins with targeting affibodies and KDEL signal peptide to cancer cells effectively induces apoptosis and tumor suppression
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Intracellular Assembly of Interacting Enzymes Yields Highly-Active Nanoparticles for Flow Biocatalysis
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Passive immunization with equine RBD-specific Fab protects K18-hACE2-mice against Alpha or Beta variants of
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RBD-VLP Vaccines Adjuvanted with Alum or SWE Protect K18-hACE2 Mice against SARS-CoV-2 VOC Challenge
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SPECIFIC SELECTION OF IMMUNE CELLS USING VERSATILE DISPLAY SCAFFOLDS
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A "Plug-and-Display" Nanoparticle Vaccine Platform Based on Outer Membrane Vesicles Displaying SARS-CoV-2 Receptor-binding Domain
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Protein Cages Engineered for Interaction-Driven Selective Encapsulation of Biomolecules
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Convection Driven Ultrarapid Protein Detection via Nanobody-Functionalized Organic Electrochemical Transistors
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Development of a synthetic nanoparticle vaccine presenting the HIV-1 envelope glycoprotein
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Nanocarriers based on bacterial membrane materials for cancer vaccine delivery
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Mechanical regulation of talin through binding and history-dependent unfolding
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TRAIL & EGFR affibody dual-display on a protein nanoparticle synergistically suppresses tumor growth
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Steric accessibility of the N-terminus improves the titer and quality of recombinant proteins secreted from Komagataella
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Liquid–Liquid Phase Separation and Assembly of Silk-like Proteins is Dependent on the Polymer Length
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ANTIBODY-GUIDED PCSK9-MIMICKING IMMUNOGENS LACKING 9-RESIDUE SEQUENCE OVERLAP WITH HUMAN PROTEINS
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Sequentially co-immobilized PET and MHET hydrolases via Spy chemistry in calcium phosphate nanocrystals present
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SpySwitch enables pH- or heat-responsive capture and release for plug-and-display nanoassembly.
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A modular dCas9-based recruitment platform for combinatorial epigenome editing
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UNIVERSAL BACTERIOPHAGE T4 NANOPARTICLE PLATFORM TO DESIGN MULTIPLEX SARS-COV-2 VACCINE CANDIDATES BY CRISPR
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Freeze-Drying of a Capsid Virus-like Particle-Based Platform Allows Stable Storage of Vaccines at Ambient Temperature
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Two-Dimensional Protein Nanoarray as a Carrier of Sensing Elements for Gold-Based Immunosensing Systems
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Peptide-Inspired One-Step Synthesis of Surface-Functionalized Fe3O4 Magnetic Nanoparticles for Oriented Enzyme Immobilization and
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ENGINEERED PROBIOTIC COMPOSITIONS AND USES THEREOF
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RECONSTITUTION OF A SPLIT-HALOTAG VIA ORTHOGONAL TAG-BINDING DOMAINS
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SCAFFOLDED ANTIGENS AND ENGINEERED SARS-COV-2 RECEPTOR-BINDING DOMAIN (RBD) POLYPEPTIDES
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A Magnetosome-Based Platform for Flow Biocatalysis
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BACTERIAL MICROCOMPARTMENT VIRUS-LIKE PARTICLES
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Lena Nitsch…MikołajSłabicki. Cell Reports Methods Apr 2022
An engineered live biotherapeutic for the prevention of antibiotic-induced dysbiosis
Andrés Cubillos-Ruiz…James J. Collins. Nature Biomedical Engineering 2022
ENZ
POLYPEPTIDE TERMINAL BINDERS AND USES THEREOF
WO/2022/072560 Publication Date 07.04.2022 ENCODIA, INC. [US]/[US]
SEQUENCING
Engineering functional membrane-membrane interface by InterSpy
Hossein Moghimianavval…Taekjip Ha. Small 26 May 2022 and bioRxiv 2022 Mar
IMAGING
Mosaic RBD nanoparticles protect against multiple sarbecovirus challenges in animal models
Alexander A. Cohen…Pamela J. Bjorkman. bioRxiv April 2022
IMMUN
B12-induced reassembly of split photoreceptor protein enables photoresponsive hydrogels with tunable mechanics
Zhongguang Yang…Fei Sun. Science Advances Apr 2022
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From 4-arm star proteins to diverse stimuli-responsive molecular networks enabled by orthogonal genetically encoded click
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Hong Kiu Francis Fok…Fei Sun. Polymer Chemistry Apr 2022
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Effect of SpyTag/SpyCatcher cyclization on stability and refolding of green fluorescent protein
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IMAGING
POLYPEPTIDE TAGGED NUCLEOTIDES AND USE THEREOF IN NUCLEIC ACID SEQUENCING BY NANOPORE
DETECTION
Patent Application Number 17201834 Publication Date 24.03.2022 Roche Sequencing Solutions, Inc.
SEQUENCING
SpyChIP identifies cell type-specific transcription factor occupancy from complex tissues
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In vitro refolding of the structural protein VP1 of parvovirus B19 produces virus-like particles with functional VP1
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Soto-Valerio, I.A….Bustos-Jaimes, I. Virology (2022) March
IMMUN
Comparison of Bacterial Expression Systems Based on Potato Virus Y-like Particles for Vaccine Generation
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IMMUN
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